It seems that the problem is enamels, or the combination of them with the polishing. WSF with acrylics or CA glue works fine, and someone had posted images of his buildings in WSFP, painted with acrylics too. Have you tried enamels over plain WSF, not polished? If that works, then it has to be the enamels+polishing.
It could be soap or water left overs from the process, that react with the enamel coats. Extra washing and drying should help, but best is probably to cover with something that resists enamels and can dry with water involved, as WSF will keep some moisture inside. Tamiya primer is not acrylic, and their normal "acrylic" paints are not like others, so beware too. Go with artists or model acrylics instead, the type that works with water and have no alcohol.
Sorry, no enamels arround, you will have to buy a small bottle of acrylic varnish, paint or medium (Vallejo's 2 pounds or less) or CA glue, and see if enamel will still react or the acrylic/CA is a good enough barrier. Anyway, clean the models with lots of water first and let them dry.